Browse of TCMCG006C03130 protein

CDS

Accession Number	TCMCG006C03130
gbkey	CDS
Protein Id	XP_022573510.1
Location	complement(join(1206897..1206938,1207037..1207123,1207224..1207298,1207402..1207518,1207616..1207699,1207942..1208007,1208155..1208220,1208508..1208579,1208657..1208767,1208967..1209077,1209155..1209223,1209300..1209408,1209630..1209718,1209822..1209896,1213278..1213400,1213618..1213737,1213809..1213889,1213964..1214110,1214199..1214277,1214895..1214969,1215273..1215382,1215480..1215578,1215851..1215966,1216053..1216161,1216245..1216463,1216565..1216830,1217010..1217167,1217263..1217413,1217545..1217614,1217904..1217933))
Gene	LOC106441322
GeneID	106441322
Organism	Brassica napus

Protein

Length	1041aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_022717789.1
Definition	ubiquitin carboxyl-terminal hydrolase 12-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	O
Description	Belongs to the peptidase C19 family
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko01002        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K11838        [VIEW IN KEGG]
EC	3.4.19.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko04068        [VIEW IN KEGG] ko05168        [VIEW IN KEGG] ko05169        [VIEW IN KEGG] ko05203        [VIEW IN KEGG] map04068        [VIEW IN KEGG] map05168        [VIEW IN KEGG] map05169        [VIEW IN KEGG] map05203        [VIEW IN KEGG]
GOs	GO:0001101        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004843        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006508        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007154        [VIEW IN EMBL-EBI] GO:0007165        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008233        [VIEW IN EMBL-EBI] GO:0008234        [VIEW IN EMBL-EBI] GO:0009719        [VIEW IN EMBL-EBI] GO:0009725        [VIEW IN EMBL-EBI] GO:0009753        [VIEW IN EMBL-EBI] GO:0009755        [VIEW IN EMBL-EBI] GO:0009867        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010033        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0019783        [VIEW IN EMBL-EBI] GO:0023052        [VIEW IN EMBL-EBI] GO:0032870        [VIEW IN EMBL-EBI] GO:0036459        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0070011        [VIEW IN EMBL-EBI] GO:0070887        [VIEW IN EMBL-EBI] GO:0071229        [VIEW IN EMBL-EBI] GO:0071310        [VIEW IN EMBL-EBI] GO:0071395        [VIEW IN EMBL-EBI] GO:0071495        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0101005        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI] GO:1901700        [VIEW IN EMBL-EBI] GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGACTATGATGACTCCGCCTCCCGTCGATCAGCAAGAGGATGAGGAGATGCTCGTGCCGCCTTCTGATGTTGTCGACGGTCCTGCTCAGCCCATGGAAGTTTCTGAAGCTGAGACTGCTGTGAGTACTGTGGAGAATCAGCCAGCTGAGGAGCCTCCCACGCTGAAATTCACGTGGACTATCCCAAACTTCTCTAGGCAAAACACCAGGAAGCTTTACTCTGATGTATTTGTCGTTGGAGGTTACAAATGGCGCATATTAATTTTCCCGAAAGGAAACAATGTTGACCACCTGTCCATGTACTTGGATGTTGCTGATGCTGCGAATTTGCCATATGGTTGGAGCCGTTACGCTCAGTTCAGTCTGGCTGTAGTCAATCAAATCCACACCAGATATACCATTAGAAAAGAGACGCAACATCAATTCAATGCTAGAGAAAGCGATTGGGGATTTACATCATTCATGCCTCTCAGCGAACTTTATGATCCTGGTAGAGGATATTTAGCGAATGATACTGTTTACGTTGAAGCTGAAGTCATTGTACGTAAGGTTCTTGATTACTGGTCATACGACTCCAAAAAAGAGACTGGTTTTGTTGGTCTCAAGAACCAAGGTGCAACTTGTTACATGAATTCTCTCCTACAGACGCTATACCACATACCTTACTTCAGAAAGGCTGTATACCACATGCCAACAACTGAGAACGATGCGCCAACAGCAAGTATACCTTTGGCTCTCCAAAGTTTGTTCTACAAGCTTCAGTATAACGACACCAGTGTTGCGACAAAAGAGCTGACAAAGTCGTTTGGTTGGGATACATATGATTCGTTCATGCAACATGATGTCCAAGAACTCAATCGAGTTCTATGTGAAAAACTCGAGGACAAAATGAAGGGAACTGTTGTGGAGGGAACAATACAACAGCTATTTGAGGGCCACCATATGAACTATATTGAGTGCATAAATGTAGATTACAAATCTACACGGAAGGAATCATTTTATGATCTTCAGTTGGATGTTAAAGGCTGCAAAGATGTTTATGCTTCTTTTGACAAATATGTTGAAGTTGAACGCCTTGAAGGAGACAACAAATATCATGCAGAAGGACATGGTTTACAGGATGCAAAAAAAGGTGTTCTTTTCATCGACTTTCCACCAGTTCTTCAGCTCCAGCTCAAGAGGTTTGAATATGACTTTATGAGGGACACCATGGTGAAGATAAATGACCGGTATGAGTTTCCTCTCCAATTGGATCTTGATAGAGAGGATGGGAAGTATTTATCCCCTGATGCTGACAGGAGTGTCCGCAACCTGTACACACTTCACAGTGTCTTAGTTCATAGTGGAGGAGTACATGGTGGGCACTATTACGCTTTTATAAGGCCCACGCTCTCAGATCAGTGGTATAAATTTGATGATGAACGAGTAACCAAGGAAGATTTGAAAAGGGCATTGGACGAGCAATATGGTGGTGAAGAAGAGCTACCACAGACTAATCCTGGTTTCAATAACCCGCCTTTCAAATTCACAAAGTACTCGAATGCATACATGCTTGTATATATCCGGGAAAGTGACAAAGATAAAATAATCTGCAACGTTGATGAGAAAGACATTGCTGAACATTTAAGGGTGAGGCTGAAGAAAGAACAAGAAGAAAAGGAAGATAAAAGAAAGTACAAGGCACAAGCTCACCTTTTTACGATAATTAAGGTTGCAAGAGATCAAGACCTCCGGGAACAAATTGGGAAGGATATATATTTTGATCTTGTTGATCATGACAAAGTTAGAAGTTTCCGGATCCAGAAACAGACGCCATTTCAACAATTTAAGGAGGAGGTGGCCAAAGAATTTGGTATACCTGTTCAGTTACAGAGGTTCTGGATCTGGGCAAAGCGACAAAATCATACTTATCGTCCCAATCGCCCACTTACTCCTCAGGAGGAATTACAACCGGTTGGACAAATAAGAGAAGCATCTAACAAGGCAAACACTGCAGAACTTAAGCTGTTTTTGGAAGTAGAGCTGCTGGATGAACGTCCTATTCCCCCTCCAGAAAAATCGAAAGAAGATATTCTTCTGTTCTTTAAGCTTTATGACCCCGAGAAGCCAGAGTTAAGGTATGTTGGCAGACTCATGGTGAAAAGTTCCAGCAAGCCTATGGATATAACTGGAAAATTGAATGAAATGGCTGGTTTTGCTCCTGATGAAGATTTAGAACTTTTTGAGGAAATCAAGTTCGAGCCTGGTGTTATGTGCGAACACCTGGATAAGAAAACTTCATTCAGATTGTGTCAAATCGAAGATGGAGATATCATTTGCTTTCAGAAACACCTTGTTAAGAAGGAGATTGAATGCCGCTACCCAGCTGTGCCTTTGTTTCTTGAATATGTCCAGAATCGGCAGGTAAATCCGACCACGTCTGATATTTTGTATTATGAAGTTCTGGACATCCCTCTTCCAGAATTGCAAGGTCTTAAAACCTTGAAAGTTGCTTTCCATCATGCCACGAAGGAAGAAGTGGTAATCCACAATATCAGACTACCTAAACAAAGCACAGTCGGGGATGTTATTGATGAACTTAAAACAAAGGTGGAGCTTTCTCATCCAGATGCAGAATTGAGATTACTTGAGGTGTTTTACCACAAGATCTACAAGATTTTCCCCTTAACTGAAAGAATTGAGAATATAAACGATCAGTACTGGACTGTACGAGCTGAGGAGATTCCGGAAGAAGAGAAGAATATTGGTCCAAATGATCGCTTAATTCTAGTGTACCACTTTGCTAAGGAGACTGGACAAAATCAGCAAGTGCAAAACTTTGGGGAGCCCTTCTTCTTGGTAATACATGAAGGCGAAACTCTTGAAGAAATCAAGAACCGTATCCAAAAGAAGCTTCATGTATCCGATGAGGACTTTGCCAAGTGGAAGTTTGCGTTTATGTCAATGGGGCGTCCAGAGTACTTGCAGGACTCAGATGTTGTTTACAATCGCTTTCAGAGAAGAGATGTGTACGGTGCTTTTGAGCAGTACCTGGGGTTGGAGCACACTGATACCACTCCCAAGAGGGCTTATTCTGCAAACCAGAACCGGCACACTTATGAGAAGCCGGTTAAAATATACAACTAG

Protein:   MTMMTPPPVDQQEDEEMLVPPSDVVDGPAQPMEVSEAETAVSTVENQPAEEPPTLKFTWTIPNFSRQNTRKLYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAANLPYGWSRYAQFSLAVVNQIHTRYTIRKETQHQFNARESDWGFTSFMPLSELYDPGRGYLANDTVYVEAEVIVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDREDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDLKRALDEQYGGEEELPQTNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRVRLKKEQEEKEDKRKYKAQAHLFTIIKVARDQDLREQIGKDIYFDLVDHDKVRSFRIQKQTPFQQFKEEVAKEFGIPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREASNKANTAELKLFLEVELLDERPIPPPEKSKEDILLFFKLYDPEKPELRYVGRLMVKSSSKPMDITGKLNEMAGFAPDEDLELFEEIKFEPGVMCEHLDKKTSFRLCQIEDGDIICFQKHLVKKEIECRYPAVPLFLEYVQNRQVNPTTSDILYYEVLDIPLPELQGLKTLKVAFHHATKEEVVIHNIRLPKQSTVGDVIDELKTKVELSHPDAELRLLEVFYHKIYKIFPLTERIENINDQYWTVRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQQVQNFGEPFFLVIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDSDVVYNRFQRRDVYGAFEQYLGLEHTDTTPKRAYSANQNRHTYEKPVKIYN